Information for motif43


Reverse Opposite:

p-value:1e-5
log p-value:-1.288e+01
Information Content per bp:1.905
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif7.98%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif2.18%
Average Position of motif in Targets379.0 +/- 303.0bp
Average Position of motif in Background355.9 +/- 252.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCATTCCT--
RCATTCCWGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GCATTCCT--
GCATTCCAGN

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCATTCCT---
CACATTCCTCCG

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCATTCCT
AGATGCAATCCC

MA0081.1_SPIB/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCATTCCT--
---TTCCTCT

POL002.1_INR/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCATTCCT
TCAGTCTT

MA0158.1_HOXA5/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCATTCCT-
-AATTAGTG

MA0101.1_REL/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCATTCCT
GGGGATTTCC-

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCCT
NGGGATTA--

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCATTCCT
YCATTAMC