Information for motif8


Reverse Opposite:

p-value:1e-18
log p-value:-4.254e+01
Information Content per bp:1.625
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif10.33%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets409.0 +/- 350.4bp
Average Position of motif in Background226.6 +/- 126.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACACHCTCAC---
--NNACTTACCTN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACACHCTCAC-
AGCCACTCAAG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACACHCTCAC-
-CRCCCACGCA

MA0472.1_EGR2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACACHCTCAC--
CCCCCGCCCACGCAC

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACACHCTCAC
AGCGGCACACACGCAA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACACHCTCAC
AASCACTCAA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACACHCTCAC
GGCCACACCCAN--

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACACHCTCAC
GGCCACACCCA---

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACACHCTCAC
AAGCACTTAA

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACACHCTCAC---
-YCCGCCCACGCN