Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 213)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 293)	% of Background Sequences with Motif
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-11	-2.676e+01	0.0000	96.0	45.07%	69.0	23.56%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-10	-2.345e+01	0.0000	65.0	30.52%	39.4	13.46%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-9	-2.235e+01	0.0000	19.0	8.92%	4.2	1.45%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-9	-2.219e+01	0.0000	93.0	43.66%	70.9	24.21%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-9	-2.152e+01	0.0000	74.0	34.74%	50.3	17.17%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-8	-2.007e+01	0.0000	79.0	37.09%	58.0	19.79%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-7	-1.799e+01	0.0000	46.0	21.60%	26.2	8.95%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-7	-1.744e+01	0.0000	76.0	35.68%	57.0	19.47%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-6	-1.561e+01	0.0000	105.0	49.30%	94.9	32.42%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-6	-1.477e+01	0.0000	107.0	50.23%	98.7	33.72%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-6	-1.451e+01	0.0000	109.0	51.17%	101.4	34.63%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-6	-1.437e+01	0.0000	18.0	8.45%	6.9	2.34%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-6	-1.430e+01	0.0000	30.0	14.08%	15.3	5.23%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-5	-1.350e+01	0.0000	62.0	29.11%	47.1	16.08%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-5	-1.223e+01	0.0001	18.0	8.45%	7.9	2.69%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-5	-1.211e+01	0.0001	46.0	21.60%	32.3	11.02%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-5	-1.169e+01	0.0001	31.0	14.55%	18.5	6.32%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-4	-1.137e+01	0.0002	105.0	49.30%	102.0	34.85%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-4	-9.805e+00	0.0007	45.0	21.13%	34.6	11.83%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-3	-9.205e+00	0.0012	69.0	32.39%	62.4	21.32%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-3	-9.034e+00	0.0014	43.0	20.19%	33.2	11.34%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-3	-8.958e+00	0.0014	8.0	3.76%	2.7	0.93%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-3	-8.828e+00	0.0016	30.0	14.08%	20.7	7.08%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-3	-8.784e+00	0.0016	58.0	27.23%	50.9	17.40%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-3	-8.573e+00	0.0019	107.0	50.23%	111.6	38.12%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-3	-7.745e+00	0.0041	82.0	38.50%	81.7	27.89%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e-3	-7.379e+00	0.0057	35.0	16.43%	27.7	9.46%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-3	-7.250e+00	0.0062	14.0	6.57%	7.3	2.49%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-3	-7.240e+00	0.0062	44.0	20.66%	37.8	12.93%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-3	-7.215e+00	0.0062	27.0	12.68%	19.4	6.64%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-3	-7.206e+00	0.0062	7.0	3.29%	2.5	0.86%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-3	-7.113e+00	0.0063	91.0	42.72%	94.8	32.38%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-3	-7.083e+00	0.0063	132.0	61.97%	149.4	51.02%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-2	-6.646e+00	0.0094	18.0	8.45%	11.6	3.97%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-2	-6.548e+00	0.0101	49.0	23.00%	44.3	15.12%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-2	-6.533e+00	0.0101	65.0	30.52%	64.0	21.85%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-2	-6.483e+00	0.0102	21.0	9.86%	14.1	4.81%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e-2	-6.445e+00	0.0103	23.0	10.80%	16.5	5.64%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-2	-6.383e+00	0.0107	12.0	5.63%	6.5	2.23%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-2	-6.328e+00	0.0110	46.0	21.60%	41.0	14.01%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-2	-6.010e+00	0.0147	80.0	37.56%	83.2	28.42%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-2	-5.825e+00	0.0173	28.0	13.15%	22.8	7.78%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-2	-5.677e+00	0.0196	22.0	10.33%	16.2	5.55%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e-2	-5.586e+00	0.0210	6.0	2.82%	2.8	0.94%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-2	-5.372e+00	0.0254	31.0	14.55%	26.9	9.20%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-2	-5.304e+00	0.0266	11.0	5.16%	7.0	2.38%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e-2	-5.286e+00	0.0266	50.0	23.47%	49.0	16.72%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-2	-5.286e+00	0.0266	50.0	23.47%	48.7	16.63%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-2	-5.234e+00	0.0268	102.0	47.89%	114.1	38.95%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-2	-5.159e+00	0.0283	155.0	72.77%	188.3	64.31%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-2	-5.104e+00	0.0293	66.0	30.99%	68.7	23.45%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-2	-5.062e+00	0.0300	13.0	6.10%	8.7	2.98%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-2	-4.981e+00	0.0319	22.0	10.33%	17.2	5.88%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-2	-4.972e+00	0.0319	7.0	3.29%	3.3	1.12%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-2	-4.972e+00	0.0319	7.0	3.29%	3.3	1.12%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-2	-4.972e+00	0.0319	7.0	3.29%	3.1	1.05%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-2	-4.910e+00	0.0319	18.0	8.45%	13.5	4.60%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-2	-4.903e+00	0.0319	45.0	21.13%	43.2	14.75%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-2	-4.829e+00	0.0333	44.0	20.66%	42.8	14.63%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-2	-4.617e+00	0.0405	35.0	16.43%	32.7	11.17%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-1	-4.463e+00	0.0465	39.0	18.31%	37.3	12.74%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-4.309e+00	0.0533	10.0	4.69%	6.5	2.23%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-1	-4.201e+00	0.0585	63.0	29.58%	67.5	23.05%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-4.180e+00	0.0588	35.0	16.43%	33.4	11.40%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-1	-4.115e+00	0.0618	5.0	2.35%	2.1	0.72%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-1	-3.922e+00	0.0738	24.0	11.27%	21.7	7.43%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-1	-3.851e+00	0.0781	80.0	37.56%	90.4	30.88%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e-1	-3.749e+00	0.0852	49.0	23.00%	51.7	17.65%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-3.743e+00	0.0852	6.0	2.82%	3.1	1.05%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-3.689e+00	0.0879	39.0	18.31%	39.5	13.48%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-3.560e+00	0.0986	42.0	19.72%	43.9	15.01%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e-1	-3.556e+00	0.0986	7.0	3.29%	4.6	1.57%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-1	-3.539e+00	0.0986	76.0	35.68%	86.6	29.57%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-1	-3.508e+00	0.0996	25.0	11.74%	23.5	8.02%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-1	-3.456e+00	0.1022	8.0	3.76%	5.2	1.77%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-1	-3.456e+00	0.1022	8.0	3.76%	5.7	1.94%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-1	-3.440e+00	0.1025	14.0	6.57%	11.3	3.87%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e-1	-3.369e+00	0.1085	56.0	26.29%	61.2	20.91%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e-1	-3.282e+00	0.1169	3.0	1.41%	0.0	0.00%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-1	-3.087e+00	0.1403	128.0	60.09%	158.2	54.03%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-3.072e+00	0.1406	18.0	8.45%	16.3	5.58%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e-1	-2.845e+00	0.1744	14.0	6.57%	12.8	4.37%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-1	-2.812e+00	0.1781	21.0	9.86%	20.2	6.91%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-2.745e+00	0.1882	20.0	9.39%	19.8	6.76%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-1	-2.678e+00	0.1989	19.0	8.92%	18.9	6.47%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-2.629e+00	0.2064	24.0	11.27%	24.0	8.21%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-1	-2.611e+00	0.2078	18.0	8.45%	18.0	6.14%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-1	-2.543e+00	0.2199	48.0	22.54%	54.0	18.45%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-1	-2.435e+00	0.2421	50.0	23.47%	57.7	19.70%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-2.395e+00	0.2492	116.0	54.46%	146.0	49.86%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-1	-2.390e+00	0.2492	30.0	14.08%	32.3	11.03%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-1	-2.390e+00	0.2492	42.0	19.72%	47.4	16.20%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-2.213e+00	0.2864	43.0	20.19%	49.0	16.74%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.213e+00	0.2864	43.0	20.19%	49.9	17.05%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.096e+00	0.3183	77.0	36.15%	94.1	32.13%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.978e+00	0.3545	53.0	24.88%	63.9	21.82%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.958e+00	0.3579	109.0	51.17%	138.9	47.45%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.875e+00	0.3810	64.0	30.05%	78.5	26.81%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.875e+00	0.3810	64.0	30.05%	78.6	26.85%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.837e+00	0.3919	26.0	12.21%	29.3	10.01%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-1.828e+00	0.3919	6.0	2.82%	5.8	1.97%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.796e+00	0.3963	2.0	0.94%	0.5	0.17%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.796e+00	0.3963	2.0	0.94%	0.5	0.17%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.789e+00	0.3963	17.0	7.98%	18.3	6.25%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.780e+00	0.3963	114.0	53.52%	146.8	50.15%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.770e+00	0.3963	25.0	11.74%	28.4	9.69%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.702e+00	0.4191	67.0	31.46%	83.2	28.40%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.646e+00	0.4390	34.0	15.96%	40.2	13.73%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.636e+00	0.4398	23.0	10.80%	26.9	9.18%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.597e+00	0.4527	62.0	29.11%	77.9	26.62%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.568e+00	0.4618	22.0	10.33%	25.8	8.81%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.504e+00	0.4883	35.0	16.43%	42.5	14.52%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.474e+00	0.4988	41.0	19.25%	50.5	17.23%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.463e+00	0.4988	8.0	3.76%	8.9	3.05%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.463e+00	0.4988	8.0	3.76%	8.4	2.86%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.447e+00	0.4990	68.0	31.92%	86.8	29.64%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.434e+00	0.5013	20.0	9.39%	23.5	8.04%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.430e+00	0.5013	37.0	17.37%	45.6	15.57%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-1.405e+00	0.5070	30.0	14.08%	36.7	12.53%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.393e+00	0.5093	87.0	40.85%	112.5	38.42%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.379e+00	0.5121	7.0	3.29%	7.3	2.49%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.366e+00	0.5144	19.0	8.92%	22.3	7.61%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.350e+00	0.5184	66.0	30.99%	84.4	28.83%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.344e+00	0.5184	15.0	7.04%	17.1	5.86%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.291e+00	0.5413	6.0	2.82%	6.0	2.05%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.259e+00	0.5544	10.0	4.69%	12.0	4.09%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.245e+00	0.5580	24.0	11.27%	30.0	10.24%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.203e+00	0.5770	36.0	16.90%	45.5	15.54%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e0	-1.197e+00	0.5770	5.0	2.35%	5.1	1.74%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.184e+00	0.5794	71.0	33.33%	92.5	31.60%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.158e+00	0.5901	56.0	26.29%	72.5	24.75%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.123e+00	0.6063	12.0	5.63%	14.7	5.04%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.120e+00	0.6063	78.0	36.62%	102.2	34.92%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.102e+00	0.6101	31.0	14.55%	40.0	13.65%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.096e+00	0.6101	4.0	1.88%	4.1	1.40%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-1.051e+00	0.6324	27.0	12.68%	35.0	11.94%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-9.943e-01	0.6644	140.0	65.73%	188.4	64.36%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-9.691e-01	0.6764	10.0	4.69%	12.4	4.22%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-9.221e-01	0.7038	59.0	27.70%	79.0	26.98%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-9.091e-01	0.7079	6.0	2.82%	7.7	2.62%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-9.072e-01	0.7079	53.0	24.88%	71.0	24.24%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-8.855e-01	0.7146	44.0	20.66%	58.3	19.91%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-8.828e-01	0.7146	18.0	8.45%	23.7	8.09%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-8.828e-01	0.7146	18.0	8.45%	23.9	8.18%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-8.372e-01	0.7344	98.0	46.01%	132.6	45.29%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-8.172e-01	0.7442	14.0	6.57%	18.0	6.16%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-8.099e-01	0.7446	89.0	41.78%	120.7	41.23%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-8.095e-01	0.7446	5.0	2.35%	6.7	2.30%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-7.852e-01	0.7529	36.0	16.90%	48.9	16.70%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-7.846e-01	0.7529	22.0	10.33%	29.2	9.96%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-7.642e-01	0.7587	16.0	7.51%	21.9	7.48%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-7.533e-01	0.7619	49.0	23.00%	66.7	22.79%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-7.395e-01	0.7675	10.0	4.69%	13.4	4.59%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-7.110e-01	0.7846	56.0	26.29%	76.7	26.20%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-7.054e-01	0.7846	15.0	7.04%	20.3	6.94%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-7.054e-01	0.7846	15.0	7.04%	20.1	6.88%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e0	-6.701e-01	0.8017	71.0	33.33%	97.4	33.28%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-6.570e-01	0.8017	1.0	0.47%	1.9	0.64%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-6.570e-01	0.8017	1.0	0.47%	1.0	0.34%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-6.570e-01	0.8017	1.0	0.47%	0.0	0.00%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-6.479e-01	0.8017	38.0	17.84%	52.8	18.03%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-6.234e-01	0.8141	11.0	5.16%	15.1	5.17%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-5.922e-01	0.8348	8.0	3.76%	11.7	3.99%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-5.805e-01	0.8348	3.0	1.41%	4.0	1.37%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-5.805e-01	0.8348	3.0	1.41%	4.3	1.47%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-5.686e-01	0.8393	28.0	13.15%	39.4	13.44%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-5.443e-01	0.8496	5.0	2.35%	7.3	2.49%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-5.443e-01	0.8496	5.0	2.35%	7.0	2.40%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-5.403e-01	0.8496	35.0	16.43%	49.7	16.98%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-5.361e-01	0.8496	69.0	32.39%	96.4	32.94%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-5.310e-01	0.8496	12.0	5.63%	17.7	6.04%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-5.110e-01	0.8580	111.0	52.11%	154.4	52.73%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-4.918e-01	0.8695	26.0	12.21%	37.3	12.73%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-4.840e-01	0.8713	99.0	46.48%	138.1	47.18%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-4.479e-01	0.8931	4.0	1.88%	6.5	2.20%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e0	-4.479e-01	0.8931	4.0	1.88%	6.3	2.14%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-4.399e-01	0.8952	2.0	0.94%	3.6	1.23%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-4.190e-01	0.9089	24.0	11.27%	35.4	12.07%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-4.183e-01	0.9089	96.0	45.07%	135.3	46.22%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-4.174e-01	0.9089	10.0	4.69%	15.6	5.32%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-4.119e-01	0.9089	41.0	19.25%	59.4	20.29%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-4.116e-01	0.9089	36.0	16.90%	52.9	18.08%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e0	-4.054e-01	0.9089	12.0	5.63%	18.6	6.34%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-3.649e-01	0.9232	7.0	3.29%	11.1	3.78%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.649e-01	0.9232	7.0	3.29%	11.9	4.07%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-3.453e-01	0.9364	3.0	1.41%	5.6	1.92%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.081e-01	0.9667	10.0	4.69%	16.4	5.59%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-3.037e-01	0.9667	32.0	15.02%	48.9	16.69%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.952e-01	0.9689	46.0	21.60%	68.3	23.32%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-2.631e-01	0.9849	1.0	0.47%	2.4	0.83%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-2.631e-01	0.9849	1.0	0.47%	2.7	0.92%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-2.631e-01	0.9849	1.0	0.47%	2.0	0.69%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-2.495e-01	0.9932	76.0	35.68%	111.5	38.07%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.488e-01	0.9932	89.0	41.78%	129.7	44.31%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-2.468e-01	0.9932	81.0	38.03%	119.0	40.64%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-2.432e-01	0.9932	53.0	24.88%	79.1	27.03%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-2.384e-01	0.9932	5.0	2.35%	9.9	3.39%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-2.353e-01	0.9932	2.0	0.94%	4.1	1.40%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-2.293e-01	0.9932	16.0	7.51%	26.7	9.13%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.155e-01	0.9932	26.0	12.21%	41.7	14.23%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.074e-01	0.9947	30.0	14.08%	47.5	16.23%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-2.031e-01	0.9947	6.0	2.82%	11.0	3.76%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.942e-01	0.9980	36.0	16.90%	56.8	19.40%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.939e-01	0.9980	11.0	5.16%	19.6	6.68%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-1.757e-01	1.0000	18.0	8.45%	31.0	10.59%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.652e-01	1.0000	153.0	71.83%	218.6	74.66%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.641e-01	1.0000	32.0	15.02%	51.6	17.63%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.546e-01	1.0000	5.0	2.35%	10.4	3.54%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.469e-01	1.0000	73.0	34.27%	110.1	37.61%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.360e-01	1.0000	22.0	10.33%	37.6	12.85%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-1.228e-01	1.0000	40.0	18.78%	64.4	21.99%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.181e-01	1.0000	7.0	3.29%	14.0	4.79%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.122e-01	1.0000	48.0	22.54%	76.9	26.26%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.040e-01	1.0000	113.0	53.05%	167.5	57.22%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.036e-01	1.0000	8.0	3.76%	16.8	5.73%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-9.866e-02	1.0000	5.0	2.35%	11.7	4.00%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-8.976e-02	1.0000	57.0	26.76%	90.2	30.79%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-8.671e-02	1.0000	52.0	24.41%	83.9	28.66%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-6.411e-02	1.0000	32.0	15.02%	55.6	18.98%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-6.355e-02	1.0000	28.0	13.15%	50.0	17.07%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-4.183e-02	1.0000	9.0	4.23%	20.2	6.89%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.255e-02	1.0000	96.0	45.07%	151.1	51.59%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-2.243e-02	1.0000	6.0	2.82%	16.7	5.69%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.861e-02	1.0000	76.0	35.68%	124.0	42.36%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.368e-02	1.0000	66.0	30.99%	111.4	38.06%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.360e-02	1.0000	4.0	1.88%	13.6	4.65%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.325e-02	1.0000	7.0	3.29%	19.5	6.66%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.240e-02	1.0000	3.0	1.41%	11.1	3.80%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.167e-02	1.0000	9.0	4.23%	23.6	8.07%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-8.153e-03	1.0000	39.0	18.31%	73.1	24.95%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e0	-5.449e-03	1.0000	20.0	9.39%	44.3	15.12%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-4.798e-03	1.0000	5.0	2.35%	17.8	6.08%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-3.337e-03	1.0000	51.0	23.94%	94.0	32.12%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.697e-03	1.0000	1.0	0.47%	8.8	3.00%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-2.444e-03	1.0000	4.0	1.88%	16.2	5.54%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-5.920e-04	1.0000	25.0	11.74%	58.3	19.92%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-3.650e-04	1.0000	8.0	3.76%	28.4	9.69%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-1.000e-06	1.0000	6.0	2.82%	34.7	11.84%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.8	0.28%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	0.5	0.16%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.9	0.32%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	1.0	0.33%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	0.2	0.08%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%