Information for motif10


Reverse Opposite:

p-value:1e-29
log p-value:-6.816e+01
Information Content per bp:1.619
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif21.64%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif3.97%
Average Position of motif in Targets451.5 +/- 450.8bp
Average Position of motif in Background597.0 +/- 516.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0112.2_ESR1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACAGGGTCTCC------
AGGTCAGGGTGACCTGGNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACAGGGTCTCC
CACAGN------

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACAGGGTCTCC--
GVACAGNMTGTYCTB

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGGTCTCC
NNATTGACAGGTGCTT-

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGGTCTCC
NNAGGGACAAGGGCNC-

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACAGGGTCTCC--
AGNACAGNCTGTTCTN

GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACAGGGTCTCC--
GRACAGWMTGTYCTB

GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GACAGGGTCTCC--
AGNACANNNTGTNCTN

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGGTCTCC
GTATTGACAGGTNNTT-

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GACAGGGTCTCC
AGCAACAGCCGCACC