Information for motif14


Reverse Opposite:

p-value:1e-25
log p-value:-5.907e+01
Information Content per bp:1.669
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif15.74%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets473.3 +/- 454.1bp
Average Position of motif in Background564.2 +/- 370.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTCTCTGCAG----
AATCGCACTGCATTCCG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCTCTGCAG
CTGTCTGG--

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTGCAG
VBSYGTCTGG--

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTGCAG-
ACCACTCTCGGTCAC

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTGCAG-
SCTGTCARCACC

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CTCTCTGCAG---
TTTTTTTTTTTTTTCAGGTT

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTCTGCAG----
--CACAGCAGGGGG

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGCAG--
-TCCCTGGGGAN

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CTCTCTGCAG---
TTTTTTTTTTTTTTCAGGTT

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTGCAG----
CCACACAGCAGGAGA