Information for motif16


Reverse Opposite:

p-value:1e-23
log p-value:-5.485e+01
Information Content per bp:1.946
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif15.08%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets510.0 +/- 464.9bp
Average Position of motif in Background363.9 +/- 174.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGTCGGCAA---
GGGCCGTGTGCAAAAA

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCGTCGGCAA-
ATTGCCTCAGGCAAT

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCGTCGGCAA
NCGTCAGC--

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCGTCGGCAA----
TCCGTCGCTTAAAAG

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGTCGGCAA----
NCTANGTCAGCAAATTT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGTCGGCAA-
ATTGCCTGAGGCAAT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGTCGGCAA-
ATTCCCTGAGGGGAA

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCGGCAA
TGAGTCAGCA-

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCGTCGGCAA
--CTTGGCAA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGTCGGCAA-
-CSTGGGAAAD