Information for motif17


Reverse Opposite:

p-value:1e-22
log p-value:-5.073e+01
Information Content per bp:1.579
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif14.43%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif2.18%
Average Position of motif in Targets413.8 +/- 353.5bp
Average Position of motif in Background557.0 +/- 395.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-RGAGGAGMTGCT
GGGAGGACNG---

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RGAGGAGMTGCT
CGGAGC-------

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RGAGGAGMTGCT
AGAGGAAGTG--

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RGAGGAGMTGCT---
NNNNAGCAGCTGCTGAN

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RGAGGAGMTGCT-----
--AGATGCTRCTRCCHT

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RGAGGAGMTGCT
NNAGCAGCTGCT

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RGAGGAGMTGCT--
GCGGAGGTGTCGCCTC

MA0080.3_Spi1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----RGAGGAGMTGCT
AAAAAGAGGAAGTGA-

EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----RGAGGAGMTGCT---
NNNGGGHAGCAHRTGCTRCC

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------RGAGGAGMTGCT
NNNACCGAGAGTNNN----