Information for motif20


Reverse Opposite:

p-value:1e-21
log p-value:-4.968e+01
Information Content per bp:1.892
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif18.36%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets378.9 +/- 318.3bp
Average Position of motif in Background806.8 +/- 530.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGGT------
GCGGAGGTGTCGCCTC

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGGT----
GGAGAAAGGTGCGA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAGGGGT--
--AGGTGTCA

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGGGGT----
--AGGTGTGAAM

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGGT-------
GGCGAGGGGTCAAGGGC

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGGGT-----
NTNTGGGGGGTCNNNA

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGGGGT--
GGAGGGGGAA

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGGGT------
NTNNNAGGAGTCTCNTN

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGAGGGGT
NGAAGC--

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGGT-------
GAAAAGGTGTGAAAATT