Information for motif23


Reverse Opposite:

p-value:1e-18
log p-value:-4.371e+01
Information Content per bp:1.860
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif21.64%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif6.48%
Average Position of motif in Targets421.6 +/- 391.4bp
Average Position of motif in Background373.0 +/- 349.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGCA
NNCACCTGNN

MA0469.1_E2F3/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCCTGCA-------
CTCCCGCCCCCACTC

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGCA
CCTCACCTG--

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGCA
ACATCCTGNT

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTGCA---
CCCCCTGCTGTG

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTGCA
CACTTCCTGT-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTGCA
NYTTCCCGCC

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CTCCTGCA---
NNTNCGCACCTGTNGAN

MA0470.1_E2F4/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTGCA-
NNTTCCCGCCC

MA0474.1_Erg/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTGCA
CCACTTCCTGT-