Information for motif25


Reverse Opposite:

p-value:1e-17
log p-value:-4.124e+01
Information Content per bp:1.542
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif16.72%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif3.83%
Average Position of motif in Targets459.1 +/- 355.2bp
Average Position of motif in Background772.1 +/- 409.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0471.1_E2F6/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGCCTCA
NCTTCCCGCCC--

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGCCTCA
TTCCCGCCWG-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCAGCCTCA
-BCAGACWA-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGCCTCA
NYTTCCCGCC---

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGCCTCA
NNTTCCCGCCC--

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCAGCCTCA----
GCCCCGCCCCCTCCC

MA0469.1_E2F3/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCAGCCTCA----
CTCCCGCCCCCACTC

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCAGCCTCA
--CAGCC---

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TCCAGCCTCA
VDTTTCCCGCCA--

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCCTCA
CCTCCCGCCCN-