Information for motif33


Reverse Opposite:

p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.530
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif9.51%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif2.33%
Average Position of motif in Targets464.1 +/- 347.3bp
Average Position of motif in Background428.5 +/- 321.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0041.1_Mafb_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTTGCTGGCAC---
AAATTTGCTGACTTAGA

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTTGCTGGCAC-
---TGCTGACTCA

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTTTGCTGGCAC
----CTTGGCAA

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCTGGCAC--
AAANTGCTGACTNAG

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCTGGCAC---
NGTAGGTTGGCATNNN

MA0161.1_NFIC/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTTTGCTGGCAC
-----TTGGCA-

MA0597.1_THAP1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTTTGCTGGCAC
---TNNGGGCAG

MA0498.1_Meis1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTTGCTGGCAC------
---AGCTGTCACTCACCT

MA0495.1_MAFF/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGCTGGCAC---
NAAAANTGCTGACTCAGC

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGCTGGCAC-
AAAWWTGCTGACWWD