Information for motif34


Reverse Opposite:

p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.530
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif9.51%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets408.7 +/- 439.8bp
Average Position of motif in Background779.5 +/- 441.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGTACCG--
CTGTTCCTGG

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GTGTACCG--
NNGCGTGTGTGCNGCN

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTGTACCG---
TCTTTGGCGTACCCTAA

MA0157.1_FOXO3/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTACCG
TGTTTACA-

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTGTACCG---
GCTGGGGGGTACCCCTT

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTGTACCG
NYYTGTTTACHN

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGTACCG
GGTAAGTA---

MA0031.1_FOXD1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTGTACCG
ATGTTTAC--

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTGTACCG--
NNNNTTGTGTGCTTNN

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGTACCG---
NTTGTTTACGTTNN