Information for motif37


Reverse Opposite:

p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.618
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif14.43%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif5.80%
Average Position of motif in Targets323.6 +/- 353.0bp
Average Position of motif in Background347.2 +/- 255.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTGCAACTCCA
AGATGCAATCCC-

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGTGCAACTCCA
ACTACAATTCCC

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTGCAACTCCA
---ACAACAC--

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTGCAACTCCA
-TTGCAACATN-

PB0169.1_Sox15_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTGCAACTCCA
TTGAATGAAATTCGA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGTGCAACTCCA
AATCGCACTGCATTCCG-

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGTGCAACTCCA--
NNAGTCCCACTCNNNN

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCAACTCCA
GAAACTGAAACT---

MA0505.1_Nr5a2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGTGCAACTCCA--
AAGTTCAAGGTCAGC

MA0122.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGTGCAACTCCA
TTAAGTGGA------