Information for motif7


Reverse Opposite:

p-value:1e-34
log p-value:-7.841e+01
Information Content per bp:1.837
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif14.43%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets302.7 +/- 241.6bp
Average Position of motif in Background1394.4 +/- 350.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCGTGGAG
--GTGGAT

MA0154.2_EBF1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGGAG--
TCCCTGGGGAN

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGTGGAG-----
GCCGCGCAGTGCGT

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCGTGGAG
GGACGTGC--

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCGTGGAG--
CCCCCCCGGGGGGGT

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:6
Score:0.52
Offset:-9
Orientation:forward strand
Alignment:---------CCGTGGAG------
TGTCATTACACGTGGAAGGCGGT

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGGAG
CACGTGGN-

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGGAG---
TCCCNNGGGACN

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCGTGGAG--
CCCCCCCGGGGGGGT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCGTGGAG
TGCGTG---