Information for motif14


Reverse Opposite:

p-value:1e-35
log p-value:-8.225e+01
Information Content per bp:1.695
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets308.4 +/- 310.8bp
Average Position of motif in Background374.2 +/- 324.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGCATCAGGGAT
CATGGCCCCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCATCAGGGAT
WTGSCCTSAGGS--

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCATCAGGGAT
ATGCCCTGAGGC--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCATCAGGGAT
ATTGCATCAK----

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCATCAGGGAT
ATTGCATCAT----

MA0003.2_TFAP2A/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCATCAGGGAT--
TGCCCTGAGGCANTN

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCATCAGGGAT
GTCCCCAGGGA-

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCATCAGGGAT
CACAGCAGGGGG

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGCATCAGGGAT-
NTCGCCTCAGGCAAT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGCATCAGGGAT-
NTNGCCTCAGGCNNN