Information for motif15


Reverse Opposite:

p-value:1e-33
log p-value:-7.726e+01
Information Content per bp:1.698
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets345.3 +/- 273.6bp
Average Position of motif in Background192.3 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTGATTAA----
NNNTTTTAATTAANNNN

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGTTGATTAA-----
TNAGNTGATCAACCGGT

PH0174.1_Vax1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTGATTAA---
CTNNGNTAATTAACNT

PH0153.1_Prop1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTGATTAA----
GNNTNTTAATTAATNCN

PH0079.1_Hoxd3/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGTGTTGATTAA---
TTGAGTTAATTAACCT

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGTGTTGATTAA-
--TGTGGATTNNN

PH0069.1_Hoxc4/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTGATTAA----
NNTNNTTAATTAATNCG

PH0060.1_Hoxb5/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTGATTAA---
ATGNGCTAATTANCNT

PH0143.1_Pou2f1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTGTTGATTAA---
ATATATTAATTAAGTA

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTTGATTAA
NNNNTTTGTTTACNNT