Information for motif16


Reverse Opposite:

p-value:1e-30
log p-value:-7.084e+01
Information Content per bp:1.594
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets369.5 +/- 465.4bp
Average Position of motif in Background1224.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0091.1_Lhx1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTATCAAATAAT---
NNTTATTAATTAATNCN

PH0172.1_Tlx2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTATCAAATAAT--
AANTTATTAATTAATTA

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TTATCAAATAAT-
------AATAATT

PH0018.1_Dbx1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTATCAAATAAT--
TNATTATTAATTAATTA

PH0101.1_Lmx1b/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATCAAATAAT---
AGTTTTTAATTAATTTG

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTATCAAATAAT
TCTTTANTAATANN

PH0100.1_Lmx1a/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTATCAAATAAT---
NNTTTTTAATTAATTCG

PH0099.1_Lhx9/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTATCAAATAAT---
NGTNATTAATTAATGNG

MA0151.1_ARID3A/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTATCAAATAAT
--ATTAAA----

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTATCAAATAAT---
NNTNATTAATTAATTCG