Information for motif17


Reverse Opposite:

p-value:1e-30
log p-value:-6.985e+01
Information Content per bp:1.789
Number of Target Sequences with motif430.0
Percentage of Target Sequences with motif11.61%
Number of Background Sequences with motif181.0
Percentage of Background Sequences with motif6.46%
Average Position of motif in Targets458.2 +/- 417.2bp
Average Position of motif in Background398.5 +/- 377.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TACGCATC----
TNNATTATGCATANNTT

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACGCATC--------
TCACCCATCAATAAACA

MA0069.1_Pax6/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TACGCATC----
TTCACGCATGAGTT

MA0124.1_NKX3-1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACGCATC
TAAGTAT-

GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TACGCATC---
NAGATWNBNATCTNN

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TACGCATC---
TTNGGGTACGCCNNANN

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TACGCATC
TACTNNNN

MA0031.1_FOXD1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TACGCATC
GTAAACAT-

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TACGCATC
CACGCA--

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TACGCATC-
---GCTTCC