Information for motif20


Reverse Opposite:

p-value:1e-28
log p-value:-6.637e+01
Information Content per bp:1.813
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets351.2 +/- 238.9bp
Average Position of motif in Background465.1 +/- 224.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0496.1_MAFK/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCAGMATCAGCA----
-CTGAGTCAGCAATTT

MA0495.1_MAFF/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCAGMATCAGCA------
GCTGAGTCAGCAATTTTT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCAGMATCAGCA
--TGAGTCAGCA

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCAGMATCAGCA
GCTGASTCAGCA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCAGMATCAGCA-----
--HWWGTCAGCAWWTTT

MA0117.1_Mafb/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCAGMATCAGCA
---NCGTCAGC-

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGMATCAGCA
ADGGYAGYAGCATCT

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCAGMATCAGCA
--TGACTCAGCA

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCAGMATCAGCA-----
NCTANGTCAGCAAATTT

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCAGMATCAGCA----
-ATGACTCAGCANWWT