Information for motif21


Reverse Opposite:

p-value:1e-27
log p-value:-6.284e+01
Information Content per bp:1.733
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets271.1 +/- 242.5bp
Average Position of motif in Background718.0 +/- 352.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCCAAATGCAT-----
TNNATTATGCATANNTT

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCCAAATGCAT---
GGACTGAATTCATGCC

MA0507.1_POU2F2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCCCAAATGCAT--
-TTCATTTGCATAT

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCCAAATGCAT----
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCCAAATGCAT----
TNTAATTTGCATACNA

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCCCAAATGCAT--
----ATTTGCATAT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCCAAATGCAT--
----ATTTGCATAA

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCCAAATGCAT------
----ACATTCATGACACG

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCCCAAATGCAT----
-TNGAATTTCATTNAN

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCCCAAATGCAT--
CGACCAACTGCCGTG