Information for motif24


Reverse Opposite:

p-value:1e-24
log p-value:-5.566e+01
Information Content per bp:1.530
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets297.7 +/- 347.0bp
Average Position of motif in Background53.9 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0145.1_Pou2f3/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATCCCAATTC--
TTGTATGCAAATTAGA

PH0144.1_Pou2f2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTATCCCAATTC--
TTGTATGCAAATTAGA

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTATCCCAATTC
TTATGCAAAT--

PB0023.1_Gata6_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTATCCCAATTC
NNANTCTTATCTNNNNN-

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTATCCCAATTC
NNCTTATCTN-----

PH0089.1_Isx/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTATCCCAATTC-----
-ACTCCTAATTAGTCGT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTATCCCAATTC
YSTTATCT------

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTATCCCAATTC
ATATGCAAAT--

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTATCCCAATTC
NCCTTATCTG-----

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTATCCCAATTC
YCTTATCWVN----