Information for motif26


Reverse Opposite:

p-value:1e-23
log p-value:-5.438e+01
Information Content per bp:1.530
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets449.8 +/- 401.9bp
Average Position of motif in Background540.8 +/- 331.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCGG-
CAAGATGGCGGC

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCGG-
CAAGATGGCGGC

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCATGGCGG------
NAGANTGGCGGGGNGNA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCATGGCGG
GTCATN----

MA0067.1_Pax2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCGG
AGTCACGC---

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCATGGCGG
-TNNGGGCAG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATCATGGCGG
AAATCACTGC--

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATCATGGCGG---
---CWGGCGGGAA

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------ATCATGGCGG
AAGGCGAAATCATCGCA-

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATCATGGCGG------
NNNNTTGGCGCCGANNN