Information for motif28


Reverse Opposite:

p-value:1e-22
log p-value:-5.190e+01
Information Content per bp:1.904
Number of Target Sequences with motif449.0
Percentage of Target Sequences with motif12.12%
Number of Background Sequences with motif210.5
Percentage of Background Sequences with motif7.51%
Average Position of motif in Targets418.2 +/- 349.2bp
Average Position of motif in Background424.6 +/- 397.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTGCA----
ANATTTTTGCAANTN

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTTTTGCA
-TTTTCCA

MA0507.1_POU2F2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTTTTGCA---
TTCATTTGCATAT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTTTTGCA---
-ATTTGCATAA

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTTTGCA---
-ATTTGCATAT

MA0102.3_CEBPA/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTGCA--
NATTGTGCAAT

MA0109.1_Hltf/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTTTTGCA
AACCTTATAT-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTTTTGCA--
ATTTTCCATT

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTGCA-----
TNTAATTTGCATACNA

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTGCA-----
TNTAATTTGCATANNN