Information for motif33


Reverse Opposite:

p-value:1e-18
log p-value:-4.367e+01
Information Content per bp:1.530
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif4.18%
Number of Background Sequences with motif52.0
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets490.0 +/- 409.8bp
Average Position of motif in Background510.5 +/- 370.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCCTCAGT---
CATGGCCCCAGGGCA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGT----
NTNGCCTCAGGCNNN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCTCAGT----
GCCTCAGGGCAT

MA0003.2_TFAP2A/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCCTCAGT---
CATTGCCTCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCTCAGT----
SCCTSAGGSCAW

POL002.1_INR/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCTCAGT---
---TCAGTCTT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGT----
NTCGCCTCAGGCAAT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGT----
ANTGCCTGAGGCAAN

MA0099.2_JUN::FOS/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGT
TGACTCA--

MA0478.1_FOSL2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCCTCAGT
GGATGACTCAT-