Information for motif35


Reverse Opposite:

p-value:1e-16
log p-value:-3.725e+01
Information Content per bp:1.954
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets517.7 +/- 400.2bp
Average Position of motif in Background720.4 +/- 597.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAATTTCTCT---
-ACTTTCACTTTC

MA0508.1_PRDM1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAATTTCTCT----
TCACTTTCACTTTCN

MA0081.1_SPIB/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAATTTCTCT
---TTCCTCT

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAATTTCTCT
CACTTCCTCT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAATTTCTCT---
-ACTTTCACTTTC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAATTTCTCT---
-AGTTTCAGTTTC

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAATTTCTCT---
NNNCTGATATCTCNNNN

MA0090.1_TEAD1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAATTTCTCT-
CACATTCCTCCG

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AAATTTCTCT---
AANTTATTGTTCTNNA

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAATTTCTCT---
TNGAATTTCATTNAN