Information for motif36


Reverse Opposite:

p-value:1e-15
log p-value:-3.456e+01
Information Content per bp:1.409
Number of Target Sequences with motif447.0
Percentage of Target Sequences with motif12.06%
Number of Background Sequences with motif231.9
Percentage of Background Sequences with motif8.27%
Average Position of motif in Targets436.6 +/- 395.3bp
Average Position of motif in Background402.6 +/- 407.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:BATATGTC--
--TATGTNTA

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--BATATGTC
RCCATMTGTT

MA0124.1_NKX3-1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:BATATGTC-
--TAAGTAT

MA0025.1_NFIL3/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:BATATGTC----
-TTATGTAACAT

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----BATATGTC----
ANNNGGATATATCCNNN

MA0109.1_Hltf/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-BATATGTC-
NNATAAGGNN

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----BATATGTC----
NNNCTGATATCTCNNNN

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:BATATGTC--
--TACGTGCV

PB0027.1_Gmeb1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----BATATGTC-----
NNNTNGTACGTAANNNN

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-BATATGTC-
GGGTACGTGC