Information for motif37


Reverse Opposite:

p-value:1e-14
log p-value:-3.402e+01
Information Content per bp:1.859
Number of Target Sequences with motif227.0
Percentage of Target Sequences with motif6.13%
Number of Background Sequences with motif98.2
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets482.5 +/- 421.6bp
Average Position of motif in Background520.6 +/- 469.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ASTGCGAA--
CSTGGGAAAD

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ASTGCGAA-
AGGTGTTAAT

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ASTGCGAA
--TGCCAA

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ASTGCGAA----
GAAAAGGTGTGAAAATT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ASTGCGAA-
AGGTGTGAAM

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ASTGCGAA-
-TTGCCAAG

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ASTGCGAA----
GNNACCGAGAATNNN

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ASTGCGAA---
TGCGGAGTGGGACTGG

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ASTGCGAA----
CGAACAGTGCTCACTAT

MA0122.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ASTGCGAA
TTAAGTGGA--