Information for motif41


Reverse Opposite:

p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets464.9 +/- 373.3bp
Average Position of motif in Background468.8 +/- 164.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0161.1_NFIC/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GACGGCCA-
---TGCCAA

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACGGCCA
YAACBGCC-

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACGGCCA
CCAACTGCCA

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GACGGCCA----
AAGCATACGCCCAACTT

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GACGGCCA
CCAGACRSVB-

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GACGGCCA----
CATAAGACCACCATTAC

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GACGGCCA--
--AGGCCTAG

MA0100.2_Myb/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACGGCCA
CCAACTGCCA

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GACGGCCA---
CGACCAACTGCCATGC

MA0160.1_NR4A2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACGGCCA-
-AAGGTCAC