Information for motif43


Reverse Opposite:

p-value:1e-2
log p-value:-5.348e+00
Information Content per bp:1.891
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif57.8
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets766.9 +/- 439.3bp
Average Position of motif in Background728.0 +/- 274.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGCCGCCG----
TCCGCCCCCGCATT

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCG-----
TACGCCCCGCCACTCTG

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCG--
CCCCCGCCCCCGCC

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CGCCGCCG----
GGTCCCGCCCCCTTCTC

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCG-----
CCTTCGGCGCCAAAAGG

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCCGCCG
AGCGCGCC-

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCG-----
AGCTCGGCGCCAAAAGC

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCCG--
YCCGCCCACGCN

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGCCGCCG--
GGCCCCGCCCCC

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCCGCCG--
GCCCCGCCCCC