Information for motif7


Reverse Opposite:

p-value:1e-40
log p-value:-9.383e+01
Information Content per bp:1.920
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets409.6 +/- 402.5bp
Average Position of motif in Background179.3 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0075.1_Prrx2/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CCCAAAATTA
-----AATTA

MA0132.1_Pdx1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CCCAAAATTA-
-----AATTAG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCAAAATTA--
DCYAAAAATAGM

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCAAAATTA-
NNTNNCAATATTAG

MA0497.1_MEF2C/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCAAAATTA---
ATGCTAAAAATAGAA

MA0052.2_MEF2A/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCAAAATTA----
AGCTAAAAATAGCAT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCAAAATTA-
-CCAAAAATAG

PH0055.1_Hoxa7_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCAAAATTA----
TNCCATTAATTACTNC

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCCAAAATTA-
-CCATATATGG

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCCAAAATTA--
-----AATTATT