Information for motif9


Reverse Opposite:

p-value:1e-39
log p-value:-9.107e+01
Information Content per bp:1.790
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets365.8 +/- 237.1bp
Average Position of motif in Background500.3 +/- 735.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0040.1_Foxq1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTACAGTGTTTA--
---TATTGTTTATT

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTACAGTGTTTA--
------TGTTTACA

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CTACAGTGTTTA---
------TGTTTATTT

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTACAGTGTTTA
CNNNGCTACTGTANNN-

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTACAGTGTTTA
CTYRAGTGSY--

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTACAGTGTTTA---
---NYYTGTTTACHN

MA0030.1_FOXF2/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTACAGTGTTTA------
----NTTGTTTACGTTNN

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTACAGTGTTTA---
----TNTGTTTACTT

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTACAGTGTTTA-
NANTTTCAAGTGGTTAN

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTACAGTGTTTA
TNNTGCTACTGTNNNN-