Information for motif1


Reverse Opposite:

p-value:1e-39
log p-value:-9.049e+01
Information Content per bp:1.814
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets529.0 +/- 360.9bp
Average Position of motif in Background410.9 +/- 146.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTGCKCGTCA---
NTTATTCGTCATNC

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCKCGTCA
NNGCNCTGCGCGGC-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTGCKCGTCA
----ACGTCA

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGCKCGTCA----
CGCGCCGGGTCACGTA

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTGCKCGTCA--
------GTCATN

MA0067.1_Pax2/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGCKCGTCA---
-----AGTCACGC

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGCKCGTCA-----
TACGCCCCGCCACTCTG

MA0018.2_CREB1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGCKCGTCA
--TGACGTCA

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGCKCGTCA
GCTGTG-----

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGCKCGTCA-
NCTGTCAATCAN