Information for motif12


Reverse Opposite:

p-value:1e-18
log p-value:-4.153e+01
Information Content per bp:1.727
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets345.5 +/- 318.9bp
Average Position of motif in Background571.6 +/- 456.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACCCCACCAGGG--
--CACAGCAGGGGG

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACCCCACCAGGG---
-CCCCCCCGGGGGNN

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACCCCACCAGGG---
NCCCCCCCGGGGGGN

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACCCCACCAGGG---
ACCCCCCCGGGGGGN

MA0103.2_ZEB1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACCCCACCAGGG
-CCTCACCTG--

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACCCCACCAGGG----------
--GCCASCAGGGGGCGCYVNNG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACCCCACCAGGG
--NNCACCTGNN

MA0154.2_EBF1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACCCCACCAGGG-
--GTCCCCAGGGA

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACCCCACCAGGG
-ATCCAC-----

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACCCCACCAGGG-
CATAAGACCACCATTAC