Information for motif13


Reverse Opposite:

p-value:1e-16
log p-value:-3.822e+01
Information Content per bp:1.510
Number of Target Sequences with motif417.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif348.6
Percentage of Background Sequences with motif9.80%
Average Position of motif in Targets444.2 +/- 374.5bp
Average Position of motif in Background486.1 +/- 468.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAAGWACTGG
--NNNANTGA

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAGWACTGG----
TTTTAAGTACTTAAATT

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAGWACTGG------
CAATCACTGGCAGAAT

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAGWACTGG----
TACTAAGTACTTAAATG

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAAGWACTGG----
TTCNAAGTACTTNNNNN

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAGWACTGG---
CTTTAAGTACTTAATG

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAAGWACTGG---
---GGTCTGGCAT

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGWACTGG---
TAAAAATGCTGACTT

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAGWACTGG
-AACAGCTG-

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAAGWACTGG----
AAAWWTGCTGACWWD