Information for motif17


Reverse Opposite:

p-value:1e-14
log p-value:-3.386e+01
Information Content per bp:1.567
Number of Target Sequences with motif461.0
Percentage of Target Sequences with motif16.38%
Number of Background Sequences with motif405.4
Percentage of Background Sequences with motif11.40%
Average Position of motif in Targets431.0 +/- 360.4bp
Average Position of motif in Background445.0 +/- 509.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TGAAATCCCAGC-
--AAATCACAGCA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGAAATCCCAGC
--AAATCACTGC

MA0038.1_Gfi1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGAAATCCCAGC
-CAAATCACTG-

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGAAATCCCAGC
AGATGCAATCCC---

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGAAATCCCAGC
--AAACCACAGC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAAATCCCAGC
-NAAACCACAG-

MA0002.2_RUNX1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAAATCCCAGC-
--AAACCACAGAN

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TGAAATCCCAGC
------CACAGN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAAATCCCAGC
--AAACCACANN

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGAAATCCCAGC
TTGAATGAAATTCGA--