Information for motif18


Reverse Opposite:

p-value:1e-14
log p-value:-3.336e+01
Information Content per bp:1.508
Number of Target Sequences with motif494.0
Percentage of Target Sequences with motif17.55%
Number of Background Sequences with motif442.4
Percentage of Background Sequences with motif12.44%
Average Position of motif in Targets506.7 +/- 445.6bp
Average Position of motif in Background466.7 +/- 582.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGAGGCTCAGGC---
-CAGGCCNNGGCCNN

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAGGCTCAGGC---
ATTGCCTCAGGCAAT

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGGCTCAGGC---
NTNGCCTCAGGCNNN

MA0524.1_TFAP2C/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCTCAGGC--
CATGGCCCCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGAGGCTCAGGC---
---SCCTSAGGSCAW

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGAGGCTCAGGC---
---GCCTCAGGGCAT

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAGGCTCAGGC
-----CACAGN-

MA0506.1_NRF1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGAGGCTCAGGC--
---TGCGCAGGCGC

MA0477.1_FOSL1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGAGGCTCAGGC
GGTGACTCATG-

MA0003.2_TFAP2A/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCTCAGGC--
CATTGCCTCAGGGCA