Information for motif19


Reverse Opposite:

p-value:1e-13
log p-value:-3.216e+01
Information Content per bp:1.500
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets361.0 +/- 317.6bp
Average Position of motif in Background1094.8 +/- 445.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0466.1_CEBPB/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTTGCTAAATT
TATTGCACAAT-

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTTGCTAAATT
-GTTGCGCAAT-

MA0102.3_CEBPA/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTTGCTAAATT
-ATTGCACAATA

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGCTAAATT
NNTTTTTCTTATNT

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTTGCTAAATT
NATGTTGCAA----

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGCTAAATT
CTGTTGCTAGGS-

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTTGCTAAATT--
CAATTGCAAAAATAT

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTTGCTAAATT--
NNTNNCAATATTAG

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGCTAAATT
NNNTTTGTTTACATTTN

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTTGCTAAATT--
GGTTCCNNAATTTG