Information for motif23


Reverse Opposite:

p-value:1e-11
log p-value:-2.747e+01
Information Content per bp:1.540
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets355.8 +/- 414.4bp
Average Position of motif in Background613.8 +/- 411.7bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GTGTGCAGTTTG
GGGCCGTGTGCAAAAA-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGCAGTTTG---
NNNANTGCAGTGCNNTT

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGCAGTTTG-
AAGTCAGCANTTTTN

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCAGTTTG
NNGCGTGTGTGCNGCN--

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGTGCAGTTTG---
CCTTGCAATTTTTNN

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGTGCAGTTTG
-TGTGGATTNNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGCAGTTTG-
NTNTATGTGCACATNNN

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGTGCAGTTTG
HWWGTCAGCAWWTTT

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGTGCAGTTTG---
CACGGCAGTTGGTNN

MA0114.2_HNF4A/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGTGCAGTTTG-----
--CTGGACTTTGGACTC