Information for motif25


Reverse Opposite:

p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.917
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets518.5 +/- 421.1bp
Average Position of motif in Background853.6 +/- 884.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCYGCCTSCA
-CTGCCCGCA

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCYGCCTSCA--
ACTTGCTACCTACACC

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCYGCCTSCA
GCTGACGC--

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCYGCCTSCA--
ACATGCTACCTAATAC

MA0474.1_Erg/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCYGCCTSCA
CCACTTCCTGT-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCYGCCTSCA
TGCTGACTCA-

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCYGCCTSCA--
CCCCCGCCCCCGCC

MA0146.2_Zfx/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCYGCCTSCA
GGGGCCGAGGCCTG--

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCYGCCTSCA
-CTGTCTGG-

MA0516.1_SP2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCYGCCTSCA---
GCCCCGCCCCCTCCC