Information for motif26


Reverse Opposite:

p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.530
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif41.1
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets649.2 +/- 518.3bp
Average Position of motif in Background537.9 +/- 682.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTCCGGGTT---
NNNNATGCGGGTNNNN

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTCCGGGTT---
GTACATCCGGATTTTT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTCCGGGTT
ACATCCTGNT-

MA0028.1_ELK1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGTCCGGGTT
CTTCCGGNNN

PB0011.1_Ehf_1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTCCGGGTT--
TNACTTCCGGNTNNN

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCCGGGTT--
NNTNNTGTCTGGNNTNG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGTCCGGGTT
ACTTCCGGNT-

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGTCCGGGTT---
TTGCCCGGATTAGG

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGTCCGGGTT
NRYTTCCGGY--

MA0133.1_BRCA1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGTCCGGGTT--
-----GTGTTGN