Information for motif27


Reverse Opposite:

p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.674
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets614.8 +/- 398.5bp
Average Position of motif in Background819.8 +/- 548.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GAACGGGGCG-----
NNNAAGGGGGCGGGNNN

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GAACGGGGCG-
GGAGAAAGGTGCGA

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAACGGGGCG-----
NNTNAGGGGCGGNNNN

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAACGGGGCG------
NNTNNGGGGCGGNGNGN

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAACGGGGCG----
GGGNGGGGGCGGGGC

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAACGGGGCG-------
NNNTNGGGCGTATNNTN

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAACGGGGCG------
--AGGGGGCGGGGCTG

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAACGGGGCG-----
---GGGGGCGGGGCC

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAACGGGGCG-------
-NNAGGGGCGGGGTNNA

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAACGGGGCG----
GGCGGGGGCGGGGG