Information for motif29


Reverse Opposite:

p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.866
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif30.1
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets409.2 +/- 359.6bp
Average Position of motif in Background637.1 +/- 420.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AATACCTTTT---
-TGACCTTTNCNT

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AATACCTTTT---
NNNNTGACCTTTNNNN

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATACCTTTT---
NNNGTGACCTTTGNNN

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AATACCTTTT-
NTAGTTAATCCCCTTAN

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AATACCTTTT-
NNGGCGACACCTCNNN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AATACCTTTT
ACTTCCTGTT

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AATACCTTTT
GATAATTAATCCCTCTT

MA0109.1_Hltf/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AATACCTTTT--
--AACCTTATAT

MA0080.3_Spi1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AATACCTTTT---
NCACTTCCTCTTTTN

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AATACCTTTT-
NTTGTTAATCCCTCTNN