Information for motif3


Reverse Opposite:

p-value:1e-25
log p-value:-5.782e+01
Information Content per bp:1.477
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets481.0 +/- 338.9bp
Average Position of motif in Background684.4 +/- 572.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.65
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0467.1_Crx/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCGAATCBTC--
-CTAATCCTCTT

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCGAATCBTC
TGCTGASTCAGC

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCGAATCBTC---
-SSAATCCACANN

MA0479.1_FOXH1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCGAATCBTC-
TCCAATCCACA

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCGAATCBTC-
-TGACTCAGCA

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGAATCBTC----
NNTAATCCNGNCNN

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCGAATCBTC
TGCTGAGTCATC

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCGAATCBTC----
TACGAGACTCCTCTAAC

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGAATCBTC----
NNNATTAATCCGNTTNA

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGAATCBTC--
NTGCTGAGTCATCCN