Information for motif35


Reverse Opposite:

p-value:1e-7
log p-value:-1.759e+01
Information Content per bp:1.592
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets450.4 +/- 369.9bp
Average Position of motif in Background664.1 +/- 371.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0111.1_Spz1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGGTAGCTGG
-AGGGTAACAGC

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGGGTAGCTGG-
--NTGCAGCTGTG

MA0500.1_Myog/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGGTAGCTGG--
---GACAGCTGCAG

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGGTAGCTGG-
-VNAVCAGCTGGC

MA0499.1_Myod1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGGTAGCTGG-
NGNGACAGCTGCN

MA0521.1_Tcf12/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGGGTAGCTGG--
---AACAGCTGCAG

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGTAGCTGG----
NNNNAGCAGCTGCTGAN

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGGGTAGCTGG--
----GCAGCTGTNN

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGGGTAGCTGG-
-NNAGCAGCTGCT

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGGGTAGCTGG
--CAGCAGCTGN