Information for motif36


Reverse Opposite:

p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.530
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets334.5 +/- 395.9bp
Average Position of motif in Background361.0 +/- 359.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0087.1_Sox5/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAACATTCTG
NAACAAT---

MA0113.2_NR3C1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAACATTCTG----
AGNACATTNTGTTCT

GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAACATTCTG---
VAGRACAKWCTGTYC

MA0041.1_Foxd3/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAACATTCTG
AAACAAACATTC--

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAACATTCTG--
--ACATCCTGNT

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAACATTCTG---
VAGRACAKNCTGTBC

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAACATTCTG---
-CACATTCCTCCG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAACATTCTG--
--RCATTCCWGG

MA0007.2_AR/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAACATTCTG---
AAGAACAGAATGTTC

MA0078.1_Sox17/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAACATTCTG
-CTCATTGTC