Information for motif41


Reverse Opposite:

p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.976
Number of Target Sequences with motif314.0
Percentage of Target Sequences with motif11.15%
Number of Background Sequences with motif302.7
Percentage of Background Sequences with motif8.52%
Average Position of motif in Targets618.3 +/- 478.2bp
Average Position of motif in Background603.3 +/- 683.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGGCC----
NTNTGGGGGGTCNNNA

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGGGGCC------
GGCGAGGGGTCAAGGGC

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGCC
GGGGNGGGGC-

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGGCC
GGGGGCGGGGCC

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGGCC
GGGGGCGGGGC-

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGCC-----
NNNGGGGCGCCCCCNN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGCC-
GGAGGGGGAA

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGCC------
NNNAAGGGGGCGGGNNN

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGCC---
ANTGCGGGGGCGGN

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GAGGGGCC-
ATTTTNGGGGGGCNN