Information for motif47


Reverse Opposite:

p-value:1e-2
log p-value:-6.128e+00
Information Content per bp:1.962
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets365.9 +/- 400.2bp
Average Position of motif in Background444.5 +/- 213.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0497.1_MEF2C/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AAAAATCG--
ATGCTAAAAATAGAA

MA0052.2_MEF2A/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAAAATCG---
AGCTAAAAATAGCAT

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAAAATCG-
DCYAAAAATAGM

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAAATCG-----
GAAAAAATTGCAAGG

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAAATCG
CCAAAAATAG

PB0136.1_IRC900814_2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAAAATCG-----
ATGGAAAGTCGTAAAA

MA0087.1_Sox5/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATCG
NAACAAT--

MA0077.1_SOX9/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATCG
GAACAATGG

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAAATCG--------
AAAACATCGTTTTTAAG

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------AAAAATCG
TACTGGAAAAAAAA-