Information for motif5


Reverse Opposite:

p-value:1e-22
log p-value:-5.250e+01
Information Content per bp:1.874
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets409.6 +/- 338.4bp
Average Position of motif in Background592.2 +/- 601.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGTGATCCGC
NTATYGATCH--

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGTGATCCGC--
CGAACAGTGCTCACTAT

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGTGATCCGC
---GCTCCG-

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTGATCCGC----
NNNNTGACCCGGCGCG

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTGATCCGC----
CNATAATCCGNTTNT

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTGATCCGC----
NNNATTAATCCGNTTNA

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTGATCCGC----
ANANGTGATACCCCATT

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGTGATCCGC---
NNNAATTAATCCCCNCN

MA0038.1_Gfi1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGTGATCCGC
CNGTGATTTN-

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGTGATCCGC----
ANANNTGATACCCNATN