Information for motif50


Reverse Opposite:

p-value:1e0
log p-value:-1.506e+00
Information Content per bp:1.794
Number of Target Sequences with motif182.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif217.0
Percentage of Background Sequences with motif6.10%
Average Position of motif in Targets707.3 +/- 481.1bp
Average Position of motif in Background816.3 +/- 828.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACCGGCGG------
NAGANTGGCGGGGNGNA

PB0020.1_Gabpa_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACCGGCGG-----
CAATACCGGAAGTGTAA

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACCGGCGG---
-CWGGCGGGAA

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCGGCGG-
AACCGGAAGT

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCGGCGG-
NACCGGAAGT

ETS(ETS)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCGGCGG-
AACCGGAAGT

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACCGGCGG
ACCGGAAG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACCGGCGG-
ANCCGGAAGT

MA0470.1_E2F4/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACCGGCGG-----
--GGGCGGGAAGG

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACCGGCGG-----
---GGCGGGAAAH