Information for motif7


Reverse Opposite:

p-value:1e-20
log p-value:-4.798e+01
Information Content per bp:1.723
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets546.9 +/- 373.6bp
Average Position of motif in Background971.1 +/- 440.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0039.2_Klf4/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCCCTCCG
GCCCCACCCA---

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CCACGCCCTCCG
TCGACCCCGCCCCTAT

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCCCTCCG
GCCMCRCCCH---

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCACGCCCTCCG
GGCCACACCCA---

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCCTCCG
GCCCCGCCCC---

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCACGCCCTCCG
GGCCACACCCAN--

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCACGCCCTCCG
CCCCCGCCCCCGCC-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCCTCCG
GCCACACCCA---

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCACGCCCTCCG
NAGCCCCGCCCCCN-

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCACGCCCTCCG
NNGGCCACGCCTTTN-